Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim42Q9D2H5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim42Q9D2H5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Gm22325-201ENSMUST00000158904 308 ntBASIC17.52■□□□□ 0.4
Trim42Q9D2H5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim42Q9D2H5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim42Q9D2H5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim42Q9D2H5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim42Q9D2H5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim42Q9D2H5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim42Q9D2H5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim42Q9D2H5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Gm26833-201ENSMUST00000180899 440 ntBASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim42Q9D2H5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Idnk-204ENSMUST00000226010 1898 ntBASIC17.5■□□□□ 0.39
Trim42Q9D2H5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim42Q9D2H5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms