Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ndc80Q9D0F1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.83■□□□□ 0.45
Ndc80Q9D0F1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ndc80Q9D0F1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.82■□□□□ 0.44
Ndc80Q9D0F1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Gm11249-201ENSMUST00000117071 859 ntBASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Gm27275-201ENSMUST00000184318 272 ntBASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndc80Q9D0F1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc80Q9D0F1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc80Q9D0F1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms