Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Gm6089-201ENSMUST00000197666 938 ntBASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Gm15590-201ENSMUST00000078419 552 ntBASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Lysmd1Q9D0E3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lysmd1Q9D0E3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Gm14701-201ENSMUST00000117156 348 ntBASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.83■□□□□ 0.6
Lysmd1Q9D0E3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd1Q9D0E3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd1Q9D0E3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd1Q9D0E3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.82■□□□□ 0.6
Lysmd1Q9D0E3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.82■□□□□ 0.6
Lysmd1Q9D0E3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd1Q9D0E3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lysmd1Q9D0E3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lysmd1Q9D0E3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Gm27867-201ENSMUST00000184778 125 ntBASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Chchd1-203ENSMUST00000224633 557 ntBASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lysmd1Q9D0E3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Lysmd1Q9D0E3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Lysmd1Q9D0E3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Mir6956-201ENSMUST00000183598 62 ntBASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lysmd1Q9D0E3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Rprl3-201ENSMUST00000157400 290 ntBASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Lysmd1Q9D0E3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms