Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdhd3Q9CYW4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdhd3Q9CYW4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Gm27454-201ENSMUST00000185090 204 ntBASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Reep4-203ENSMUST00000226563 1444 ntBASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Gm9988-201ENSMUST00000069786 435 ntBASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdhd3Q9CYW4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Hdhd3Q9CYW4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hdhd3Q9CYW4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms