Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim13Q9CYB0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim13Q9CYB0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim13Q9CYB0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Gm22325-201ENSMUST00000158904 308 ntBASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Gm9988-201ENSMUST00000069786 435 ntBASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim13Q9CYB0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.21■□□□□ 0.18
Trim13Q9CYB0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.21■□□□□ 0.18
Trim13Q9CYB0 Reep4-203ENSMUST00000226563 1444 ntBASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Trim13Q9CYB0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim13Q9CYB0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms