Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssr1Q9CY50 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Gm7291-201ENSMUST00000199147 382 ntBASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.97■□□□□ 0.63
Ssr1Q9CY50 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssr1Q9CY50 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssr1Q9CY50 Gm10849-201ENSMUST00000100397 618 ntBASIC18.96■□□□□ 0.63
Ssr1Q9CY50 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssr1Q9CY50 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssr1Q9CY50 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.96■□□□□ 0.63
Ssr1Q9CY50 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssr1Q9CY50 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ssr1Q9CY50 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.95■□□□□ 0.62
Ssr1Q9CY50 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssr1Q9CY50 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssr1Q9CY50 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms