Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Gm11249-201ENSMUST00000117071 859 ntBASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Gm27275-201ENSMUST00000184318 272 ntBASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Khdc3Q9CWU5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Khdc3Q9CWU5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Khdc3Q9CWU5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Khdc3Q9CWU5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Mir2861-201ENSMUST00000175539 82 ntBASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Khdc3Q9CWU5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Gm10138-203ENSMUST00000206952 366 ntBASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Khdc3Q9CWU5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Khdc3Q9CWU5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Khdc3Q9CWU5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc3Q9CWU5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc3Q9CWU5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Khdc3Q9CWU5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms