Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smc3Q9CW03 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.64■□□□□ 0.89
Smc3Q9CW03 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc3Q9CW03 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smc3Q9CW03 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.64■□□□□ 0.89
Smc3Q9CW03 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Smc3Q9CW03 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.64■□□□□ 0.89
Smc3Q9CW03 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc3Q9CW03 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smc3Q9CW03 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smc3Q9CW03 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc3Q9CW03 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.63■□□□□ 0.89
Smc3Q9CW03 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc3Q9CW03 Gm29791-202ENSMUST00000207888 369 ntBASIC20.63■□□□□ 0.89
Smc3Q9CW03 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.63■□□□□ 0.89
Smc3Q9CW03 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc3Q9CW03 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc3Q9CW03 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smc3Q9CW03 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Smc3Q9CW03 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Smc3Q9CW03 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smc3Q9CW03 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smc3Q9CW03 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.61■□□□□ 0.89
Smc3Q9CW03 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.61■□□□□ 0.89
Smc3Q9CW03 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.61■□□□□ 0.89
Smc3Q9CW03 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smc3Q9CW03 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Smc3Q9CW03 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.6■□□□□ 0.89
Smc3Q9CW03 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.6■□□□□ 0.89
Smc3Q9CW03 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Smc3Q9CW03 Gm13148-201ENSMUST00000118892 745 ntBASIC20.6■□□□□ 0.89
Smc3Q9CW03 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.6■□□□□ 0.89
Smc3Q9CW03 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smc3Q9CW03 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Smc3Q9CW03 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smc3Q9CW03 Flg-201ENSMUST00000050758 1488 ntBASIC20.6■□□□□ 0.89
Smc3Q9CW03 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.6■□□□□ 0.89
Smc3Q9CW03 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.59■□□□□ 0.89
Smc3Q9CW03 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smc3Q9CW03 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc3Q9CW03 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc3Q9CW03 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc3Q9CW03 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc3Q9CW03 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smc3Q9CW03 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc3Q9CW03 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.58■□□□□ 0.89
Smc3Q9CW03 Gm26524-201ENSMUST00000192339 390 ntBASIC20.58■□□□□ 0.89
Smc3Q9CW03 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc3Q9CW03 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc3Q9CW03 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc3Q9CW03 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc3Q9CW03 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc3Q9CW03 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Smc3Q9CW03 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc3Q9CW03 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc3Q9CW03 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc3Q9CW03 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Smc3Q9CW03 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.58■□□□□ 0.88
Smc3Q9CW03 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.57■□□□□ 0.88
Smc3Q9CW03 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.57■□□□□ 0.88
Smc3Q9CW03 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms