Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldnd1Q9CQX5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cldnd1Q9CQX5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.96■□□□□ 0.47
Cldnd1Q9CQX5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldnd1Q9CQX5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldnd1Q9CQX5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.96■□□□□ 0.47
Cldnd1Q9CQX5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldnd1Q9CQX5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cldnd1Q9CQX5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 AW822252-206ENSMUST00000208904 237 ntBASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.95■□□□□ 0.46
Cldnd1Q9CQX5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldnd1Q9CQX5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Gm13884-201ENSMUST00000118103 829 ntBASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldnd1Q9CQX5 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Gm27459-201ENSMUST00000184860 107 ntBASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldnd1Q9CQX5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Gm43347-201ENSMUST00000200226 580 ntBASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Tgds-204ENSMUST00000228543 1594 ntBASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldnd1Q9CQX5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms