Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Gm11539-201ENSMUST00000119837 557 ntBASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Gm13436-201ENSMUST00000120418 567 ntBASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lsm7Q9CQQ8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lsm7Q9CQQ8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Gm13559-201ENSMUST00000120476 863 ntBASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm7Q9CQQ8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lsm7Q9CQQ8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lsm7Q9CQQ8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm7Q9CQQ8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms