Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim11Q99PQ2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Gm12896-201ENSMUST00000118430 226 ntBASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim11Q99PQ2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim11Q99PQ2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim11Q99PQ2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim11Q99PQ2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.96■□□□□ 0.79
Trim11Q99PQ2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim11Q99PQ2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim11Q99PQ2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim11Q99PQ2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim11Q99PQ2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim11Q99PQ2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim11Q99PQ2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim11Q99PQ2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Gm11643-201ENSMUST00000119578 864 ntBASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim11Q99PQ2 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.95■□□□□ 0.78
Trim11Q99PQ2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.94■□□□□ 0.78
Trim11Q99PQ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim11Q99PQ2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim11Q99PQ2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Gm11249-201ENSMUST00000117071 859 ntBASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Gm13401-201ENSMUST00000117074 291 ntBASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Gm15375-201ENSMUST00000119510 849 ntBASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.93■□□□□ 0.78
Trim11Q99PQ2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.93■□□□□ 0.78
Trim11Q99PQ2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim11Q99PQ2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms