Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim16Q99PP9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim16Q99PP9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.14■□□□□ 0.33
Trim16Q99PP9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.14■□□□□ 0.33
Trim16Q99PP9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim16Q99PP9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.13■□□□□ 0.33
Trim16Q99PP9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.13■□□□□ 0.33
Trim16Q99PP9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim16Q99PP9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim16Q99PP9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.13■□□□□ 0.33
Trim16Q99PP9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trim16Q99PP9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Gm20049-201ENSMUST00000219950 730 ntBASIC17.12■□□□□ 0.33
Trim16Q99PP9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim16Q99PP9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Gm12527-201ENSMUST00000117967 564 ntBASIC17.11■□□□□ 0.33
Trim16Q99PP9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim16Q99PP9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim16Q99PP9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Gm2559-201ENSMUST00000201323 363 ntBASIC17.1■□□□□ 0.33
Trim16Q99PP9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms