Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Gm37722-201ENSMUST00000193757 208 ntBASIC17.93■□□□□ 0.46
Cdh23Q99PF4 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh23Q99PF4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh23Q99PF4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Gm27702-201ENSMUST00000184512 56 ntBASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh23Q99PF4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh23Q99PF4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Gm13401-201ENSMUST00000117074 291 ntBASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh23Q99PF4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Cdh23Q99PF4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Cdh23Q99PF4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdh23Q99PF4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44357-201ENSMUST00000195897 142 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm19658-201ENSMUST00000196231 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44367-201ENSMUST00000196836 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44350-201ENSMUST00000197197 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44390-201ENSMUST00000197533 144 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44313-201ENSMUST00000198018 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44486-201ENSMUST00000198508 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44454-201ENSMUST00000198541 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44314-201ENSMUST00000199263 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44394-201ENSMUST00000199558 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44484-201ENSMUST00000199873 138 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms