Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf111Q99ML9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rnf111Q99ML9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rnf111Q99ML9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rnf111Q99ML9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17■□□□□ 0.31
Rnf111Q99ML9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rnf111Q99ML9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf111Q99ML9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Rab3c-203ENSMUST00000224180 967 ntBASIC16.99■□□□□ 0.31
Rnf111Q99ML9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf111Q99ML9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Rnf111Q99ML9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Haglr-201ENSMUST00000100000 2085 ntBASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.97■□□□□ 0.31
Rnf111Q99ML9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf111Q99ML9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms