Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tlr3Q99MB1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tlr3Q99MB1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Gm18025-201ENSMUST00000221733 862 ntBASIC18.83■□□□□ 0.6
Tlr3Q99MB1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr3Q99MB1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.82■□□□□ 0.6
Tlr3Q99MB1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Mir8112-201ENSMUST00000184382 131 ntBASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Gm42545-201ENSMUST00000202755 922 ntBASIC18.81■□□□□ 0.6
Tlr3Q99MB1 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tlr3Q99MB1 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr3Q99MB1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr3Q99MB1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr3Q99MB1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr3Q99MB1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tlr3Q99MB1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.79■□□□□ 0.6
Tlr3Q99MB1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tlr3Q99MB1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr3Q99MB1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr3Q99MB1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.79■□□□□ 0.6
Tlr3Q99MB1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms