Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Gm6623-201ENSMUST00000173570 544 ntBASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nkx6-1Q99MA9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Gm26039-201ENSMUST00000158152 144 ntBASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Gm27742-201ENSMUST00000184667 60 ntBASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Gm43514-201ENSMUST00000198852 424 ntBASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Gm6443-201ENSMUST00000203599 874 ntBASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nkx6-1Q99MA9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Gm13401-201ENSMUST00000117074 291 ntBASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Gm27357-201ENSMUST00000183754 135 ntBASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Nkx6-1Q99MA9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Gm25925-201ENSMUST00000158314 306 ntBASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx6-1Q99MA9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx6-1Q99MA9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Gm10418-201ENSMUST00000100943 576 ntBASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx6-1Q99MA9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms