Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RtcbQ99LF4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RtcbQ99LF4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
RtcbQ99LF4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RtcbQ99LF4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RtcbQ99LF4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RtcbQ99LF4 Gm6443-201ENSMUST00000203599 874 ntBASIC21.66■■□□□ 1.06
RtcbQ99LF4 Birc2-201ENSMUST00000054878 378 ntBASIC21.66■■□□□ 1.06
RtcbQ99LF4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RtcbQ99LF4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RtcbQ99LF4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RtcbQ99LF4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RtcbQ99LF4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Gm28659-201ENSMUST00000188013 759 ntBASIC21.65■■□□□ 1.06
RtcbQ99LF4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.65■■□□□ 1.06
RtcbQ99LF4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.65■■□□□ 1.06
RtcbQ99LF4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RtcbQ99LF4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RtcbQ99LF4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RtcbQ99LF4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RtcbQ99LF4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RtcbQ99LF4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.64■■□□□ 1.05
RtcbQ99LF4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.64■■□□□ 1.05
RtcbQ99LF4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RtcbQ99LF4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RtcbQ99LF4 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.63■■□□□ 1.05
RtcbQ99LF4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RtcbQ99LF4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.62■■□□□ 1.05
RtcbQ99LF4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RtcbQ99LF4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.62■■□□□ 1.05
RtcbQ99LF4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RtcbQ99LF4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
RtcbQ99LF4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RtcbQ99LF4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.62■■□□□ 1.05
RtcbQ99LF4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RtcbQ99LF4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RtcbQ99LF4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.62■■□□□ 1.05
RtcbQ99LF4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RtcbQ99LF4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RtcbQ99LF4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RtcbQ99LF4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.61■■□□□ 1.05
RtcbQ99LF4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RtcbQ99LF4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.61■■□□□ 1.05
RtcbQ99LF4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.61■■□□□ 1.05
RtcbQ99LF4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RtcbQ99LF4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RtcbQ99LF4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RtcbQ99LF4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RtcbQ99LF4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RtcbQ99LF4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms