Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vmp1Q99KU0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vmp1Q99KU0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vmp1Q99KU0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vmp1Q99KU0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vmp1Q99KU0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Gm10653-202ENSMUST00000139570 835 ntBASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Gm20760-201ENSMUST00000179197 648 ntBASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Gm8969-201ENSMUST00000199694 526 ntBASIC16.91■□□□□ 0.3
Vmp1Q99KU0 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vmp1Q99KU0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmp1Q99KU0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vmp1Q99KU0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Gm12896-201ENSMUST00000118430 226 ntBASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmp1Q99KU0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Gm2399-201ENSMUST00000104944 225 ntBASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.88■□□□□ 0.29
Vmp1Q99KU0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.88■□□□□ 0.29
Vmp1Q99KU0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmp1Q99KU0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vmp1Q99KU0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmp1Q99KU0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmp1Q99KU0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms