Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha9Q91Y11 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha9Q91Y11 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha9Q91Y11 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha9Q91Y11 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha9Q91Y11 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha9Q91Y11 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha9Q91Y11 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.63■□□□□ 0.57
Pcdha9Q91Y11 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha9Q91Y11 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Gm715-201ENSMUST00000117865 831 ntBASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha9Q91Y11 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha9Q91Y11 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms