Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Pcdhb22Q91XZ8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb22Q91XZ8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb22Q91XZ8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb22Q91XZ8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb22Q91XZ8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Timm23-208ENSMUST00000226683 750 ntBASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb22Q91XZ8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhb22Q91XZ8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Pcdhb22Q91XZ8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms