Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.04■□□□□ 0.48
Pcdhb6Q91XZ4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.03■□□□□ 0.48
Pcdhb6Q91XZ4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb6Q91XZ4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhb6Q91XZ4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhb6Q91XZ4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb6Q91XZ4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Gm20760-201ENSMUST00000179197 648 ntBASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Gm10698-201ENSMUST00000182663 604 ntBASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Gm43183-201ENSMUST00000200632 547 ntBASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Gm37519-201ENSMUST00000191687 2210 ntBASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb6Q91XZ4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb6Q91XZ4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Gm15378-201ENSMUST00000121894 207 ntBASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Gm12382-201ENSMUST00000122005 922 ntBASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb6Q91XZ4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms