Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Gm10418-201ENSMUST00000100943 576 ntBASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhga11Q91XY8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhga11Q91XY8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga11Q91XY8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga11Q91XY8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga11Q91XY8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhga11Q91XY8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms