Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Nespas-201ENSMUST00000143738 1083 ntBASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgb2Q91XX7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Haglr-201ENSMUST00000100000 2085 ntBASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhgb2Q91XX7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgb2Q91XX7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.47■□□□□ 0.23
Pcdhgb2Q91XX7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.46■□□□□ 0.23
Pcdhgb2Q91XX7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhgb2Q91XX7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb2Q91XX7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb2Q91XX7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms