Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ddx41Q91VN6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.08■□□□□ 0.81
Ddx41Q91VN6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Ddx41Q91VN6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx41Q91VN6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Ddx41Q91VN6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx41Q91VN6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ddx41Q91VN6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ddx41Q91VN6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Gm21814-202ENSMUST00000203277 873 ntBASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ddx41Q91VN6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ddx41Q91VN6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.04■□□□□ 0.8
Ddx41Q91VN6 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.04■□□□□ 0.8
Ddx41Q91VN6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ddx41Q91VN6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ddx41Q91VN6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms