Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp25Q8VIK1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Mir5122-201ENSMUST00000175004 89 ntBASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.37■□□□□ 0.53
Snrnp25Q8VIK1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Snrnp25Q8VIK1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Gm10252-201ENSMUST00000209541 832 ntBASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snrnp25Q8VIK1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snrnp25Q8VIK1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.33■□□□□ 0.53
Snrnp25Q8VIK1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 Gm12085-201ENSMUST00000119263 940 ntBASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.33■□□□□ 0.52
Snrnp25Q8VIK1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms