Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
TraipQ8VIG6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TraipQ8VIG6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.65■□□□□ 0.58
TraipQ8VIG6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Gm18101-201ENSMUST00000215769 548 ntBASIC18.65■□□□□ 0.58
TraipQ8VIG6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TraipQ8VIG6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TraipQ8VIG6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
TraipQ8VIG6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TraipQ8VIG6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Mir1668-201ENSMUST00000184114 107 ntBASIC18.64■□□□□ 0.57
TraipQ8VIG6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.64■□□□□ 0.57
TraipQ8VIG6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.64■□□□□ 0.57
TraipQ8VIG6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TraipQ8VIG6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
TraipQ8VIG6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Gm7370-201ENSMUST00000219471 767 ntBASIC18.63■□□□□ 0.57
TraipQ8VIG6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TraipQ8VIG6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.63■□□□□ 0.57
TraipQ8VIG6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TraipQ8VIG6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TraipQ8VIG6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TraipQ8VIG6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TraipQ8VIG6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TraipQ8VIG6 Gm22697-201ENSMUST00000175194 63 ntBASIC18.62■□□□□ 0.57
TraipQ8VIG6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TraipQ8VIG6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TraipQ8VIG6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TraipQ8VIG6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.62■□□□□ 0.57
TraipQ8VIG6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TraipQ8VIG6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
TraipQ8VIG6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Gm23634-201ENSMUST00000175071 91 ntBASIC18.61■□□□□ 0.57
TraipQ8VIG6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TraipQ8VIG6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms