Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Flg-201ENSMUST00000050758 1488 ntBASIC18.16■□□□□ 0.5
Trim60Q8VI40 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim60Q8VI40 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Gm44549-201ENSMUST00000208351 577 ntBASIC18.15■□□□□ 0.5
Trim60Q8VI40 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.15■□□□□ 0.5
Trim60Q8VI40 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.15■□□□□ 0.5
Trim60Q8VI40 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.15■□□□□ 0.5
Trim60Q8VI40 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim60Q8VI40 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.14■□□□□ 0.5
Trim60Q8VI40 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim60Q8VI40 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Trim60Q8VI40 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trim60Q8VI40 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Trim60Q8VI40 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.14■□□□□ 0.49
Trim60Q8VI40 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim60Q8VI40 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Gm10849-201ENSMUST00000100397 618 ntBASIC18.13■□□□□ 0.49
Trim60Q8VI40 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Mir8112-201ENSMUST00000184382 131 ntBASIC18.13■□□□□ 0.49
Trim60Q8VI40 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim60Q8VI40 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.12■□□□□ 0.49
Trim60Q8VI40 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim60Q8VI40 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim60Q8VI40 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim60Q8VI40 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim60Q8VI40 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim60Q8VI40 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim60Q8VI40 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim60Q8VI40 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim60Q8VI40 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms