Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
Cspg4Q8VHY0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.05■□□□□ 0
Cspg4Q8VHY0 Gm6736-201ENSMUST00000166583 948 ntBASIC15.05■□□□□ 0
Cspg4Q8VHY0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cspg4Q8VHY0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.05■□□□□ 0
Cspg4Q8VHY0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cspg4Q8VHY0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.05■□□□□ 0
Cspg4Q8VHY0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cspg4Q8VHY0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Gm2756-201ENSMUST00000195851 400 ntBASIC15.05■□□□□ -0
Cspg4Q8VHY0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg4Q8VHY0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.04■□□□□ -0
Cspg4Q8VHY0 Il3ra-202ENSMUST00000223589 738 ntBASIC15.04■□□□□ -0
Cspg4Q8VHY0 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.04■□□□□ -0
Cspg4Q8VHY0 Gm10566-201ENSMUST00000086739 996 ntBASIC15.04■□□□□ -0
Cspg4Q8VHY0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg4Q8VHY0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.03■□□□□ -0
Cspg4Q8VHY0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Gm37025-201ENSMUST00000195159 829 ntBASIC15.03■□□□□ -0
Cspg4Q8VHY0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cspg4Q8VHY0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cspg4Q8VHY0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg4Q8VHY0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg4Q8VHY0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg4Q8VHY0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Cspg4Q8VHY0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cspg4Q8VHY0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg4Q8VHY0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cspg4Q8VHY0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.02□□□□□ -0.01
Cspg4Q8VHY0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg4Q8VHY0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg4Q8VHY0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cspg4Q8VHY0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.02□□□□□ -0.01
Cspg4Q8VHY0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Gm26039-201ENSMUST00000158152 144 ntBASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Gm24841-201ENSMUST00000158676 357 ntBASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Gm5264-201ENSMUST00000190584 848 ntBASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Gm9731-201ENSMUST00000209480 747 ntBASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Gm11452-201ENSMUST00000122376 690 ntBASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.01□□□□□ -0.01
Cspg4Q8VHY0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms