Protein–RNA interactions for Protein: Q8VHT7

Gtf3a, Transcription factor IIIA, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3aQ8VHT7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gtf3aQ8VHT7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gtf3aQ8VHT7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Gm10517-202ENSMUST00000192970 758 ntBASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gtf3aQ8VHT7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Gm12085-201ENSMUST00000119263 940 ntBASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gtf3aQ8VHT7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.11■□□□□ 0.01
Gtf3aQ8VHT7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms