Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rab40cQ8VHQ4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Gm13146-201ENSMUST00000118508 780 ntBASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rab40cQ8VHQ4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Gm13534-201ENSMUST00000121169 513 ntBASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rab40cQ8VHQ4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Rab40cQ8VHQ4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab40cQ8VHQ4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rab40cQ8VHQ4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Rab40cQ8VHQ4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rab40cQ8VHQ4 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rab40cQ8VHQ4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms