Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam20bQ8VCS3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam20bQ8VCS3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam20bQ8VCS3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam20bQ8VCS3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.34■□□□□ 0.21
Fam20bQ8VCS3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.34■□□□□ 0.21
Fam20bQ8VCS3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Fam20bQ8VCS3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Fam20bQ8VCS3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Fam20bQ8VCS3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Fam20bQ8VCS3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Fam20bQ8VCS3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Fam20bQ8VCS3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Fam20bQ8VCS3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Gm15039-201ENSMUST00000118914 875 ntBASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Gm43060-201ENSMUST00000200621 289 ntBASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Fam20bQ8VCS3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Haglr-201ENSMUST00000100000 2085 ntBASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Fam20bQ8VCS3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Gm38205-201ENSMUST00000192243 258 ntBASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.3■□□□□ 0.2
Fam20bQ8VCS3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Fam20bQ8VCS3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fam20bQ8VCS3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam20bQ8VCS3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fam20bQ8VCS3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Fam20bQ8VCS3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam20bQ8VCS3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Fam20bQ8VCS3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms