Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpap2Q8VC34 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Gm10517-202ENSMUST00000192970 758 ntBASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rpap2Q8VC34 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpap2Q8VC34 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.22■□□□□ 0.67
Rpap2Q8VC34 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpap2Q8VC34 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap2Q8VC34 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap2Q8VC34 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap2Q8VC34 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms