Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 Gm10653-202ENSMUST00000139570 835 ntBASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Top1mtQ8R4U6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Top1mtQ8R4U6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Gm5643-201ENSMUST00000117081 966 ntBASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Top1mtQ8R4U6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Top1mtQ8R4U6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Top1mtQ8R4U6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Top1mtQ8R4U6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top1mtQ8R4U6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Top1mtQ8R4U6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.95■□□□□ 0.94
Top1mtQ8R4U6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top1mtQ8R4U6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top1mtQ8R4U6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Top1mtQ8R4U6 Gm37292-201ENSMUST00000192062 758 ntBASIC20.95■□□□□ 0.94
Top1mtQ8R4U6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Top1mtQ8R4U6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.95■□□□□ 0.94
Top1mtQ8R4U6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Top1mtQ8R4U6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Top1mtQ8R4U6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms