Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.57■□□□□ 0.4
Nudcd3Q8R1N4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nudcd3Q8R1N4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nudcd3Q8R1N4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nudcd3Q8R1N4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nudcd3Q8R1N4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nudcd3Q8R1N4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.56■□□□□ 0.4
Nudcd3Q8R1N4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nudcd3Q8R1N4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nudcd3Q8R1N4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nudcd3Q8R1N4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nudcd3Q8R1N4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nudcd3Q8R1N4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nudcd3Q8R1N4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Gm6420-201ENSMUST00000193885 723 ntBASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nudcd3Q8R1N4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nudcd3Q8R1N4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nudcd3Q8R1N4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nudcd3Q8R1N4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nudcd3Q8R1N4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms