Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx54Q8K4L0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx54Q8K4L0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx54Q8K4L0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx54Q8K4L0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx54Q8K4L0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx54Q8K4L0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx54Q8K4L0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Ddx54Q8K4L0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC22.94■■□□□ 1.26
Ddx54Q8K4L0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC22.94■■□□□ 1.26
Ddx54Q8K4L0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx54Q8K4L0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx54Q8K4L0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
Ddx54Q8K4L0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx54Q8K4L0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Vti1a-206ENSMUST00000225529 1244 ntBASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Gm38308-201ENSMUST00000194934 1809 ntBASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx54Q8K4L0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 AC138767.1-201ENSMUST00000222661 415 ntBASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Ddx54Q8K4L0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx54Q8K4L0 Gm7935-201ENSMUST00000100555 1278 ntBASIC22.91■■□□□ 1.26
Ddx54Q8K4L0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC22.91■■□□□ 1.26
Ddx54Q8K4L0 Gm1401-201ENSMUST00000122048 772 ntBASIC22.91■■□□□ 1.26
Ddx54Q8K4L0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx54Q8K4L0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC22.91■■□□□ 1.26
Ddx54Q8K4L0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC22.91■■□□□ 1.26
Ddx54Q8K4L0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
Ddx54Q8K4L0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx54Q8K4L0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 AC161829.1-201ENSMUST00000220298 281 ntBASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx54Q8K4L0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ddx54Q8K4L0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ddx54Q8K4L0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Gm2213-201ENSMUST00000197485 688 ntBASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx54Q8K4L0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 Gm8000-201ENSMUST00000188378 592 ntBASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms