Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mrpl47Q8K2Y7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Gm10418-201ENSMUST00000100943 576 ntBASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mrpl47Q8K2Y7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Gm29791-202ENSMUST00000207888 369 ntBASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Mrpl47Q8K2Y7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.39■□□□□ 0.38
Mrpl47Q8K2Y7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mrpl47Q8K2Y7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Mrpl47Q8K2Y7 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Gm7290-201ENSMUST00000104990 617 ntBASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Gm12918-201ENSMUST00000120234 636 ntBASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Gm15710-201ENSMUST00000121821 636 ntBASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Gm5075-201ENSMUST00000196916 622 ntBASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl47Q8K2Y7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl47Q8K2Y7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl47Q8K2Y7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Mrpl47Q8K2Y7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl47Q8K2Y7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl47Q8K2Y7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms