Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 Gm10812-201ENSMUST00000099864 546 ntBASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtn1Q8K0T0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Gm10517-202ENSMUST00000192970 758 ntBASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.22■□□□□ 0.83
Rtn1Q8K0T0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtn1Q8K0T0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Gm4974-201ENSMUST00000209974 875 ntBASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtn1Q8K0T0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Mir1199-201ENSMUST00000117015 119 ntBASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtn1Q8K0T0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rtn1Q8K0T0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rtn1Q8K0T0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rtn1Q8K0T0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms