Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Gm13559-201ENSMUST00000120476 863 ntBASIC17.17■□□□□ 0.34
Scamp1Q8K021 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Scamp1Q8K021 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scamp1Q8K021 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Scamp1Q8K021 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scamp1Q8K021 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.17■□□□□ 0.34
Scamp1Q8K021 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scamp1Q8K021 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scamp1Q8K021 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scamp1Q8K021 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.16■□□□□ 0.34
Scamp1Q8K021 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Odf3b-204ENSMUST00000227834 930 ntBASIC17.16■□□□□ 0.34
Scamp1Q8K021 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.16■□□□□ 0.34
Scamp1Q8K021 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scamp1Q8K021 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Gm10231-201ENSMUST00000181584 441 ntBASIC17.15■□□□□ 0.34
Scamp1Q8K021 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Gm10175-202ENSMUST00000208752 441 ntBASIC17.15■□□□□ 0.34
Scamp1Q8K021 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.15■□□□□ 0.34
Scamp1Q8K021 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scamp1Q8K021 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Scamp1Q8K021 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Gm11643-201ENSMUST00000119578 864 ntBASIC17.13■□□□□ 0.33
Scamp1Q8K021 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scamp1Q8K021 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms