Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Fst-202ENSMUST00000223640 2612 ntBASIC16.48■□□□□ 0.23
Rfwd3Q8CIK8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Gm15378-201ENSMUST00000121894 207 ntBASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Rfwd3Q8CIK8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Gm10698-201ENSMUST00000182663 604 ntBASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.46■□□□□ 0.23
Rfwd3Q8CIK8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rfwd3Q8CIK8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rfwd3Q8CIK8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Rfwd3Q8CIK8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rfwd3Q8CIK8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rfwd3Q8CIK8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Gm18025-201ENSMUST00000221733 862 ntBASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rfwd3Q8CIK8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rfwd3Q8CIK8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms