Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sox30Q8CGW4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Gm13148-201ENSMUST00000118892 745 ntBASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Mir6349-201ENSMUST00000184059 97 ntBASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sox30Q8CGW4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Gm5874-201ENSMUST00000096101 508 ntBASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sox30Q8CGW4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox30Q8CGW4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Rab3c-203ENSMUST00000224180 967 ntBASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox30Q8CGW4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox30Q8CGW4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sox30Q8CGW4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox30Q8CGW4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox30Q8CGW4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.14■□□□□ 0.65
Sox30Q8CGW4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox30Q8CGW4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.14■□□□□ 0.65
Sox30Q8CGW4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox30Q8CGW4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms