Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 BC021767-201ENSMUST00000126387 1716 ntBASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rp1l1Q8CGM2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rp1l1Q8CGM2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rp1l1Q8CGM2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1l1Q8CGM2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1l1Q8CGM2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rp1l1Q8CGM2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rp1l1Q8CGM2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Gm37935-201ENSMUST00000192012 982 ntBASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1l1Q8CGM2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1l1Q8CGM2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms