Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Gm17661-201ENSMUST00000170317 270 ntBASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf222Q8CEF8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.14■□□□□ 0.34
Rnf222Q8CEF8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Gm16061-201ENSMUST00000122167 857 ntBASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf222Q8CEF8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Mir5130-201ENSMUST00000175160 84 ntBASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf222Q8CEF8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf222Q8CEF8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf222Q8CEF8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf222Q8CEF8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf222Q8CEF8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf222Q8CEF8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf222Q8CEF8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms