Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb7Q8CDY9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb7Q8CDY9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb7Q8CDY9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Gm2559-201ENSMUST00000201323 363 ntBASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb7Q8CDY9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb7Q8CDY9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb7Q8CDY9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb7Q8CDY9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb7Q8CDY9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Pcdhb7Q8CDY9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb7Q8CDY9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb7Q8CDY9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms