Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc38Q8CDN8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc38Q8CDN8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Mir6349-201ENSMUST00000184059 97 ntBASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Gm10602-201ENSMUST00000098239 609 ntBASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc38Q8CDN8 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Gm13401-201ENSMUST00000117074 291 ntBASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Gm10138-203ENSMUST00000206952 366 ntBASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ccdc38Q8CDN8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc38Q8CDN8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms