Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm27867-201ENSMUST00000184778 125 ntBASIC27.3■■□□□ 1.96
Pabpn1Q8CCS6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Pabpn1Q8CCS6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pabpn1Q8CCS6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pabpn1Q8CCS6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 Gm44872-201ENSMUST00000207864 420 ntBASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 AC159114.1-201ENSMUST00000220349 266 ntBASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pabpn1Q8CCS6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 Gm13312-201ENSMUST00000119631 718 ntBASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pabpn1Q8CCS6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Gm15590-201ENSMUST00000078419 552 ntBASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pabpn1Q8CCS6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC27.26■■□□□ 1.95
Pabpn1Q8CCS6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Pabpn1Q8CCS6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC27.26■■□□□ 1.95
Pabpn1Q8CCS6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Pabpn1Q8CCS6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Pabpn1Q8CCS6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Pabpn1Q8CCS6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Gm11336-201ENSMUST00000118168 334 ntBASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Gm5648-201ENSMUST00000122244 1587 ntBASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
Pabpn1Q8CCS6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pabpn1Q8CCS6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pabpn1Q8CCS6 Gm15165-201ENSMUST00000118140 502 ntBASIC27.24■■□□□ 1.95
Pabpn1Q8CCS6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC27.24■■□□□ 1.95
Pabpn1Q8CCS6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC27.24■■□□□ 1.95
Pabpn1Q8CCS6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Pabpn1Q8CCS6 Gm6089-201ENSMUST00000197666 938 ntBASIC27.24■■□□□ 1.95
Pabpn1Q8CCS6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pabpn1Q8CCS6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pabpn1Q8CCS6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
Pabpn1Q8CCS6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC27.23■■□□□ 1.95
Pabpn1Q8CCS6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC27.23■■□□□ 1.95
Pabpn1Q8CCS6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC27.23■■□□□ 1.95
Pabpn1Q8CCS6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Pabpn1Q8CCS6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Pabpn1Q8CCS6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pabpn1Q8CCS6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pabpn1Q8CCS6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pabpn1Q8CCS6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pabpn1Q8CCS6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Pabpn1Q8CCS6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pabpn1Q8CCS6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pabpn1Q8CCS6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 Gm7230-201ENSMUST00000173026 815 ntBASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 Chchd1-203ENSMUST00000224633 557 ntBASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pabpn1Q8CCS6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Pabpn1Q8CCS6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Pabpn1Q8CCS6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pabpn1Q8CCS6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC27.2■■□□□ 1.94
Pabpn1Q8CCS6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC27.2■■□□□ 1.94
Pabpn1Q8CCS6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms