Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Gm13216-201ENSMUST00000117145 591 ntBASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Gm6420-201ENSMUST00000193885 723 ntBASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Nespas-201ENSMUST00000143738 1083 ntBASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lysmd4Q8CC84 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lysmd4Q8CC84 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Gm29791-202ENSMUST00000207888 369 ntBASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lysmd4Q8CC84 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Lysmd4Q8CC84 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lysmd4Q8CC84 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lysmd4Q8CC84 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lysmd4Q8CC84 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Lysmd4Q8CC84 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lysmd4Q8CC84 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lysmd4Q8CC84 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lysmd4Q8CC84 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms