Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf170Q8CBG9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf170Q8CBG9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Gm6211-202ENSMUST00000167849 925 ntBASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf170Q8CBG9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Mir5133-201ENSMUST00000174955 77 ntBASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rnf170Q8CBG9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf170Q8CBG9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rnf170Q8CBG9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rnf170Q8CBG9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rnf170Q8CBG9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf170Q8CBG9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rnf170Q8CBG9 Tgds-204ENSMUST00000228543 1594 ntBASIC14.82□□□□□ -0.04
Rnf170Q8CBG9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf170Q8CBG9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf170Q8CBG9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf170Q8CBG9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rnf170Q8CBG9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms