Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim9Q8C7M3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim9Q8C7M3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim9Q8C7M3 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.36■□□□□ 0.69
Trim9Q8C7M3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim9Q8C7M3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim9Q8C7M3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Gm10698-201ENSMUST00000182663 604 ntBASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim9Q8C7M3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Trim9Q8C7M3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim9Q8C7M3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trim9Q8C7M3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim9Q8C7M3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim9Q8C7M3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim9Q8C7M3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim9Q8C7M3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim9Q8C7M3 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Gm43183-201ENSMUST00000200632 547 ntBASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim9Q8C7M3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Gm12382-201ENSMUST00000122005 922 ntBASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Gm20760-201ENSMUST00000179197 648 ntBASIC19.31■□□□□ 0.68
Trim9Q8C7M3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim9Q8C7M3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim9Q8C7M3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim9Q8C7M3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim9Q8C7M3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim9Q8C7M3 Gm15378-201ENSMUST00000121894 207 ntBASIC19.29■□□□□ 0.68
Trim9Q8C7M3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim9Q8C7M3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim9Q8C7M3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim9Q8C7M3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim9Q8C7M3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim9Q8C7M3 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.29■□□□□ 0.68
Trim9Q8C7M3 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim9Q8C7M3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms