Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Cfap54Q8C6S9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cfap54Q8C6S9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.84■□□□□ 0.29
Cfap54Q8C6S9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap54Q8C6S9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap54Q8C6S9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cfap54Q8C6S9 Tgds-204ENSMUST00000228543 1594 ntBASIC16.83■□□□□ 0.29
Cfap54Q8C6S9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.83■□□□□ 0.29
Cfap54Q8C6S9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Cfap54Q8C6S9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap54Q8C6S9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Cfap54Q8C6S9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap54Q8C6S9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cfap54Q8C6S9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Gm28659-201ENSMUST00000188013 759 ntBASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.83■□□□□ 0.28
Cfap54Q8C6S9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap54Q8C6S9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Gm5864-201ENSMUST00000202263 970 ntBASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cfap54Q8C6S9 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Gm13884-201ENSMUST00000118103 829 ntBASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Gm45328-201ENSMUST00000210942 917 ntBASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Gm37935-201ENSMUST00000192012 982 ntBASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap54Q8C6S9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap54Q8C6S9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms