Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
4933409G03RikQ8C5U0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
4933409G03RikQ8C5U0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
4933409G03RikQ8C5U0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
4933409G03RikQ8C5U0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
4933409G03RikQ8C5U0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
4933409G03RikQ8C5U0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Gm9731-201ENSMUST00000209480 747 ntBASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
4933409G03RikQ8C5U0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Gm21362-201ENSMUST00000194272 928 ntBASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
4933409G03RikQ8C5U0 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
4933409G03RikQ8C5U0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
4933409G03RikQ8C5U0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
4933409G03RikQ8C5U0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
4933409G03RikQ8C5U0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
4933409G03RikQ8C5U0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Il3ra-202ENSMUST00000223589 738 ntBASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933409G03RikQ8C5U0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19■□□□□ 0.63
4933409G03RikQ8C5U0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Gm7367-201ENSMUST00000057611 492 ntBASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
4933409G03RikQ8C5U0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms